Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs61783988 chr1:16342597 A/G 2.41E-5 492 31.9 25.93 67.52 KM Plot
PRAD rs61799470 chr1:93663043 T/C 1.19E-8 493 31.3 28.13 9.17 KM Plot
PRAD rs61799497 chr1:93699595 A/G 3.59E-6 494 31.37 26.8 18.97 KM Plot
PRAD rs61799517 chr1:93775017 C/T 3.62E-6 494 31.3 28.13 18.97 KM Plot
PRAD rs61799538 chr1:93806698 C/T 3.62E-6 494 31.3 28.13 18.97 KM Plot
PRAD rs61863300 chr10:99413491 G/T 3.39E-9 489 31.37 29.28 24.67 KM Plot
PRAD rs61878683 chr11:36301165 A/T 8.19E-5 485 31.13 32.47 26.37 KM Plot
PRAD rs61946977 chr13:24025204 T/C 5.24E-6 491 30.97 28.93 16.08 KM Plot
PRAD rs61946995 chr13:24043515 T/C 5.39E-6 488 30.93 31.38 20.53 KM Plot
PRAD rs61948395 chr13:24966854 C/G 0.000154 481 29.52 32.43 28.1 KM Plot
PRAD rs61948396 chr13:24968470 A/T 0.000149 480 29.63 32.47 28.1 KM Plot
PRAD rs62038619 chr16:5002838 G/A 4.86E-5 474 31.27 29.63 27.77 KM Plot
PRAD rs62073261 chr17:62973719 G/A 8.78E-9 489 30.8 31.37 19.63 KM Plot
PRAD rs62073271 chr17:62979574 A/G 8.4E-9 489 30.8 31.37 19.63 KM Plot
PRAD rs62073272 chr17:62979614 T/C 8.4E-9 489 30.8 31.37 19.63 KM Plot